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Journal Article
Morales-Hojas, R., Vieira, C. P., Reis, M., & Vieira, J. (2009). Comparative analysis of five immunity-related genes reveals different levels of adaptive evolution in the virilis and melanogaster groups of Drosophila. Heredity, 102(6), 573 - 578.
Morales-Hojas, R., Päällysaho, S., Vieira, C. P., Hoikkala, A., & Vieira, J. (2007). Comparative polytene chromosome maps of D. montana and D. virilis. Chromosoma, 116(1), 21 - 27.
Reis, M., Vieira, C. P., Morales-Hojas, R., Aguiar, B., et al. (2011). A comparative study of the short term cold resistance response in distantly related Drosophila species: The role of regucalcin and Frost. PLoS ONE, 6(10).
Aguiar, B., Vieira, J., Cunha, A. E., Fonseca, N. A., et al. (2015). Convergent evolution at the gametophytic self-incompatibility system in Malus and Prunus. PLoS ONE, 10(5).
Fonseca, N. A., Vieira, C. P., Schlötterer, C., & Vieira, J. (2012). The DAIBAM MITE element is involved in the origin of one fixed and two polymorphic Drosophila virilis phylad inversions. Fly, 6(2), 71 - 74.
Brito, Â., Ramos, V., Mota, R., Lima, S., et al. (2017). Description of new genera and species of marine cyanobacteria from the Portuguese Atlantic coast. Molecular Phylogenetics and Evolution, 111, 18 - 34.
Vieira, J., Morales-Hojas, R., Santos, R. A. M., & Vieira, C. P. (2007). Different positively selected sites at the gametophytic self-incompatibility pistil S-RNase gene in the Solanaceae and Rosaceae (Prunus, Pyrus, and Malus). Journal of Molecular Evolution, 65(2), 175 - 185.
Fonseca, N. A., Morales-Hojas, R., Reis, M., Rocha, H., et al. (2013). Drosophila americana as a model species for comparative studies on the molecular basis of phenotypic variation. Genome Biology and Evolution, 5(4), 661 - 679.
Reis, M., Sousa-Guimarães, S., Vieira, C. P., Sunkel, C. E., & Vieira, J. (2011). Drosophila genes that affect meiosis duration are among the meiosis related genes that are more often found duplicated. PLoS ONE, 6(3).
Araújo, A. R., Reis, M., Rocha, H., Aguiar, B., et al. (2013). The Drosophila melanogaster methuselah Gene: A Novel Gene with Ancient Functions. PLoS ONE, 8(5).
Reis, M., Silva, A. C., Vieira, C. P., & Vieira, J. (2016). The Drosophila melanogaster Muc68E mucin gene influences adult size, starvation tolerance, and cold recovery. G3: Genes, Genomes, Genetics, 6(7), 1841 - 1851.
Costas, J., Pereira, P. S., Vieira, C. P., Pinho, S., et al. (2004). Dynamics and function of intron sequences of the wingless gene during the evolution of the Drosophila genus. Evolution and Development, 6(5), 325 - 335.
Päällysaho, S., Vieira, C. P., Hoikkala, A., & Vieira, J. (2005). Evidence for introgression in differentiated North-American and Finnish Drosophila montana populations. Genetica, 123(3), 285 - 293.
Morales-Hojas, R., Vieira, C. P., & Vieira, J. (2006). The evolutionary history of the transposable element Penelope in the Drosophila virilis group of species. Journal of Molecular Evolution, 63(2), 262 - 273.
Vieira, J., Ferreira, P. G., Aguiar, B., Fonseca, N. A., & Vieira, C. P. (2010). Evolutionary patterns at the RNase based gametophytic self - Incompatibility system in two divergent Rosaceae groups (Maloideae and Prunus). BMC Evolutionary Biology, 10(1).
Fonseca, N. A., Vieira, C. P., & Vieira, J. (2009). Gene classification based on amino acid motifs and residues: The DLX (distal-less) test case. PLoS ONE, 4(6).
Tsukamoto, T., Potter, D., Tao, R., Vieira, C. P., et al. (2008). Genetic and molecular characterization of three novel S-haplotypes in sour cherry (Prunus cerasus L.). Journal of Experimental Botany, 59(11), 3169 - 3185.
Vieira, J., & Vieira, C. P. (2010). On the identification of human selected loci in grapevines. Heredity, 104(4), 327 - 328.
Vieira, J., Santos, R. A. M., Ferreira, S. M., & Vieira, C. P. (2008). Inferences on the number and frequency of S-pollen gene (SFB) specificities in the polyploid Prunus spinosa. Heredity, 101(4), 351 - 358.
Morales-Hojas, R., Vieira, C. P., & Vieira, J. (2008). Inferring the evolutionary history of Drosophila americana and Drosophila novamexicana using a multilocus approach and the influence of chromosomal rearrangements in single gene analyses. Molecular Ecology, 17(12), 2910 - 2926.
Cruz, E., Vieira, J., Gonçalves, R., Alves, H., et al. (2004). Involvement of the Major Histocompatibility Complex region in the regulation regulation of circulating CD8+ T-cell numbers in humans. Tissue Antigens, 64(1), 25 - 34.
Vieira, C. P., Almeida, A., Dias, J. D., & Vieira, J. (2006). On the location of the gene(s) harbouring the advantageous variant that maintains the X/4 fusion of Drosophila americana. Genetical Research, 87(3), 163 - 174.

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