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Journal Article
Schäfer, M. A., Mazzi, D., Klappert, K., Kauranen, H., et al. (2010). A microsatellite linkage map for Drosophila montana shows large variation in recombination rates, and a courtship song trait maps to an area of low recombination. Journal of Evolutionary Biology, 23(3), 518 - 527.
Santos, C. L., Vieira, J., Sellstedt, A., Normand, P., et al. (2007). Modulation of Frankia alni ACN14a oxidative stress response: Activity, expression and phylogeny of catalases. Physiologia Plantarum, 130(3), 454 - 463.
Schäfer, M. A., Routtu, J., Vieira, J., Hoikkala, A., et al. (2011). Multiple quantitative trait loci influence intra-specific variation in genital morphology between phylogenetically distinct lines of Drosophila montana. Journal of Evolutionary Biology, 24(9), 1879 - 1886.
Santos, C. L., Vieira, J., Tavares, F., Benson, D. R., et al. (2008). On the nature of fur evolution: A phylogenetic approach in Actinobacteria. BMC Evolutionary Biology, 8(1).
Cruz, E., Whittington, C., Krikler, S. H., Mascarenhas, C., et al. (2008). A new 500 kb haplotype associated with high CD8+ T-lymphocyte numbers predicts a less severe expression of hereditary hemochromatosis. BMC medical genetics, 9, 97.
Aguiar, B., Vieira, J., Cunha, A. E., & Vieira, C. P. (2015). No evidence for Fabaceae Gametophytic self-incompatibility being determined by Rosaceae, Solanaceae, and Plantaginaceae S-RNase lineage genes. BMC Plant Biology, 15(1).
Vieira, J., Mendes, M. V., Albuquerque, P., Moradas-Ferreira, P., & Tavares, F. (2007). A novel approach for the identification of bacterial taxa-specific molecular markers. Letters in Applied Microbiology, 44(5), 506 - 512.
Vieira, J., Fonseca, N. A., Santos, R. A. M., Habu, T., et al. (2008). The number, age, sharing and relatedness of S-locus specificities in Prunus. Genetics Research, 90(1), 17 - 26.
Reis, M., Vieira, C. P., Morales-Hojas, R., & Vieira, J. (2008). An old bilbo-like non-LTR retroelement insertion provides insight into the relationship of species of the virilis group. Gene, 425(1-2), 48 - 55.
Aguiar, B., Vieira, J., Cunha, A. E., Fonseca, N. A., et al. (2013). Patterns of evolution at the gametophytic self-incompatibility Sorbus aucuparia (Pyrinae) S pollen genes support the non-self recognition by multiple factors model. Journal of Experimental Botany, 64(8), 2423 - 2434.
Morales-Hojas, R., & Vieira, J. (2012). Phylogenetic Patterns of Geographical and Ecological Diversification in the Subgenus Drosophila. PLoS ONE, 7(11).
Santos, J. S., Fonseca, N. A., Vieira, C. P., Vieira, J., & Casares, F. (2010). Phylogeny of the teashirt-related zinc finger (tshz) gene family and analysis of the developmental expression of tshz2 and tshz3b in the zebrafish. Developmental Dynamics, 239(3), 1010 - 1018.
Fonseca, N. A., Vieira, C. P., Holland, P. W. H., & Vieira, J. (2008). Protein evolution of ANTP and PRD homeobox genes. BMC Evolutionary Biology, 8(1).
Vieira, J., Santos, R. A. M., Habu, T., Tao, R., & Vieira, C. P. (2008). The Prunus self-incompatibility locus (S locus) is seldom rearranged. Journal of Heredity, 99(6), 657 - 660.
Vieira, J., Cardoso, C. S., Pinto, J., Patil, K., et al. (2007). A putative gene located at the MHC class I region around the D6S105 marker contributes to the setting of CD8+ T-lymphocyte numbers in humans. International Journal of Immunogenetics, 34(5), 359 - 367.
Vieira, J., Teles, E., Santos, R. A. M., & Vieira, C. P. (2008). Recombination at prunus S-locus region SLFL1 gene. Genetics, 180(1), 483 - 491.
Morales-Hojas, R., Reis, M., Vieira, C. P., & Vieira, J. (2011). Resolving the phylogenetic relationships and evolutionary history of the Drosophila virilis group using multilocus data. Molecular Phylogenetics and Evolution, 60(2), 249 - 258.
Vieira, J., Fonseca, N. A., & Vieira, C. P. (2009). RNase-based gametophytic self-incompatibility evolution: Questioning the hypothesis of multiple independent recruitments of the s-pollen gene. Journal of Molecular Evolution, 69(1), 32 - 41.
Vieira, J., Fonseca, N. A., & Vieira, C. P. (2008). An S-RNase-based gametophytic self-incompatibility system evolved only once in eudicots. Journal of Molecular Evolution, 67(2), 179 - 190.
Temudo, T., Oliveira, P., Santos, M., Dias, K., et al. (2007). Stereotypies in Rett syndrome: Analysis of 83 patients with and without detected MECP2 mutations. Neurology, 68(15), 1183 - 1187.
Cruz, E., Vieira, J., Almeida, S., Lacerda, R., et al. (2006). A study of 82 extended HLA haplotypes in HFE-C282Y homozygous hemochromatosis subjects: Relationship to the genetic control of CD8+ T-lymphocyte numbers and severity of iron overload. BMC Medical Genetics, 7.
Lagisz, M., Wen, S. - Y., Routtu, J., Klappert, K., et al. (2012). Two distinct genomic regions, harbouring the period and fruitless genes, affect male courtship song in Drosophila montana. Heredity, 108(6), 602 - 608.
Nunes, M. D. S., Santos, R. A. M., Ferreira, S. M., Vieira, J., & Vieira, C. P. (2006). Variability patterns and positively selected sites at the gametophytic self-incompatibility pollen SFB gene in a wild self-incompatible Prunus spinosa (Rosaceae) population. New Phytologist, 172(3), 577 - 587.

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